Publications of COSMIC members

Bonnist, EYM and Jones, AC (2008).
Long-Wavelength Fluorescence from 2-Aminopurine-Nucleobase Dimers in DNA
Chemphyschem 9(8):1121 - 1129.

Li, M and Arlt, J (2008).
Trapping multiple particles in single optical tweezers
Optics Communications 281:135–140.

Youngblood, B, Bonnist, E, Dryden, DTF, Jones, AC, and Reich, NO (2008).
Differential stabilization of reaction intermediates: specificity checkpoints for M.EcoRI revealed by transient fluorescence and fluorescence lifetime studies
Nucleic Acids Research 36(9):2917 - 2925.

Besseling, R, Weeks, ER, Schofield, A, and Poon, W (2007).
Three-Dimensional Imaging of Colloidal Glasses under Steady Shear
Physical Review Letters 99:028301.

Clegg, PS, Herzig, EM, Schofield, AB, Egelhaaf, SU, Horozov, TS, Binks, BP, Cates, ME, and Poon, WCK (2007).
Emulsification of Partially Miscible Liquids Using Colloidal Particles: Nonspherical and Extended Domain Structures
Langmuir 23(11):5984--5994.

Ferapontova, EE, Terry, JG, Walton, AJ, Mountford, CP, Crain, J, Buck, AH, Dickinson, P, Campbell, CJ, Beattie, JS, Ghazal, P, and Mount, AR (2007).
Electrochemical deposition of Zn on TiN microelectrode arrays for microanodes
Electrochemistry Comm. Deposition; Microanodes 9:303–309.

Isa, L, Besseling, R, and Poon, WCK (2007).
Shear zones and wall slip in the capillary flow of concentrated colloidal suspensions
Phys. Review Letters 98:703–706.

Lenz, T, Bonnist, EY, Pljevaljcic, G, Neely, RK, Dryden, DT, Scheidig, AJ, Jones, AC, and Weinhold, E (2007).
2-Aminopurine Flipped into the Active Site of the Adenine-Specific DNA Methyltransferase M.TaqI: Crystal Structures and Time-Resolved Fluorescence
Journal of the American Chemical Society 129(19):6240--6248.

Millington, M, Grindlay, GJ, Altenbach, K, Neely, RK, Kolch, W, Bencina, M, Read, ND, Jones, AC, Dryden, DTF, and Magennis, SW (2007).
High-precision FLIM-FRET in fixed and living cells reveals heterogeneity in a simple cfp-yfp fusion protein
Biophysical Chem. 127:155–164.

Wright, GD, Arlt, J, Poon, WCK, and Read, ND (2007).
Optical tweezer micromanipulation of filamentous fungi
Fungal Genetics and Biology 44(1):1–13.

Wright, GD, Arlt, J, Poon, WCK, and Read, ND (2007).
Experimentally manipulating fungi with optical tweezers
Mycoscience 48:1340--3540.

Lafong, A, Hossack, WJ, Arlt, J, Nowakowski, TJ, and Read, ND (2006).
Time-multiplexed Laguerre-Gaussian holographic optical tweezers for biological applications
Optics Express 14(7):3065–3072.

Lafong, A, Hossack, WJ, Arlt, J, Nowakowski, TJ, and Read, ND (2006).
Multiple trap Laguerre-Gaussian holographic optical tweezers using a multiplexed ferroelectric SLM
In: Optical Trapping and Optical Micromanipulation III. SPIE, San Diego, pages 63262S.

Mount, AR, Mountford, CP, Evans, SA, Su, TJ, Buck, AH, Dickinson, P, Campbell, CJ, Keane, LM, Terry, JG, Beattie, JS, Walton, AJ, Ghazal, P, and Crain, J (2006).
The stability and characteristics of a DNA holliday junction switch
Biophysical Chem. Control 124:214–221.

Mountford, CP, Mount, AR, Evans, SA, Su, TJ, Dickinson, P, Buck, AH, Campbell, CJ, Terry, JG, Beattie, JS, Walton, AJ, Ghazal, P, and Crain, J (2006).
Time-resolved FRET and FLIM of four-way DNA junctions
J. Fluorescence 16:839–845.

Terry, JG, Campbell, CJ, Ross, AJ, Livingston, AD, Buck, AH, Dickinson, P, Mountford, CP, Evans, SA, Mount, AR, Beattie, JS, Crain, J, Ghazal, P, and Walton, AJ (2006).
Improved silicon nitride surfaces for next-generation microarrays
Langmuir 22:11400–11404.

Wilson, L, Besseling, R, Arlt, J, and Poon, WCK (2006).
Linear and nonlinear microrheology of dense colloidal suspensions
In: Optical Trapping and Optical Micromanipulation III. SPIE, San Diego, pages 63261P.

Arlt, J, Duncan, WJ, and Poon, WCK (2005).
Hydrodynamics of bacterial suspensions
In: Optical Trapping and Optical Micromanipulation II, edited by Dholakia, K. and Spalding, G. C.. SPIE, pages 59300L.

Beales, PA, Gordon, VD, Zhao, ZJ, Egelhaaf, SU, and Poon, WCK (2005).
Solid-like domains in fluid membranes
J. Phys.-Condensed Matter 17:S3341–S3346.

Clegg, PS, Herzig, EM, Schofield, AB, Horozov, TS, Binks, BP, Cates, ME, and Poon, WCK (2005).
Colloid-stabilized emulsions: behaviour as the interfacial tension is reduced
J. Phys.-Condensed Matter 17:S3433–S3438.

Harvey, AR, Fletcher-Holmes, DW, Gorman, A, Altenbach, K, Arlt, J, and Read, ND (2005).
Spectral imaging in a snapshot
In: Spectral Imaging: Instrumentation, Applications, and Analysis III, edited by Bearman, G. H. and Mahadevan-Jansen, A. and Levenson, R. M., pages 110–119.

Magennis, SW, Graham, EM, and Jones, AC (2005).
Quantitative spatial mapping of mixing in microfluidic systems
Angewandte Chemie-International Edition 44:6512–6516.

Magennis, SW, MacKay, FS, Jones, AC, Tait, KM, and Sadler, PJ (2005).
Two-photon-induced photoisomerization of an azo dye
Chem. Materials 17:2059–2062.

Neely, RK, Daujotyte, D, Grazulis, S, Magennis, SW, Dryden, DTF, Klimasauskas, S, and Jones, AC (2005).
Time-resolved fluorescence of 2-aminopurine as a probe of base flipping in m.hhai-DNA complexes
Nucleic Acids Research 33:6953–6960.

Roca, MG, Arlt, J, Jeffree, CE, and Read, ND (2005).
Cell biology of conidial anastomosis tubes in Neurospora Crassa
Eukaryotic Cell 4(5):911–919.